Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium etli CFN 42 (GCF_000092045.1)

Found 78 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 62 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Rhizobium etli CFN 42, or try another query

RHE_RS13980 RHE_CH02730 WP_011425978.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

RR42_RS25890: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Cupriavidus basilensis

 62% id,
98% cov

Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans

 61% id,
93% cov

ILVE_MYCS2 / A0R066: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycolicibacterium smegmatis
A0R066: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycolicibacterium smegmatis

 54% id,
99% cov

More...

RHE_RS13975 RHE_CH02729 WP_011425977.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

 52% id,
99% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 42% id,
96% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 41% id,
97% cov

More...

RHE_RS27850 RHE_PF00273 WP_042120054.1: amino acid aminotransferase
is similar to:		 PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

 37% id,
99% cov

RHE_RS09970 RHE_CH01953 WP_011425229.1: D-amino-acid transaminase
is similar to:		 PaperBLAST

GB|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus

 34% id,
96% cov

A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis

 34% id,
92% cov

B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum

 29% id,
91% cov

More...

RHE_RS06100 RHE_CH01190 WP_011424529.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis

 30% id,
96% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

 30% id,
93% cov

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / RF|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 29% id,
94% cov

More...

RHE_RS13645 RHE_CH02666 WP_042118702.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 28% id,
94% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 28% id,
82% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 26% id,
88% cov

RHE_RS06525 RHE_CH01275 WP_020920788.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

 27% id,
93% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 26% id,
85% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 25% id,
83% cov

More...

RHE_RS30015 RHE_PD00118 WP_026188837.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

 27% id,
90% cov

RHE_RS11675 RHE_CH02284 WP_011425544.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 26% id,
91% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 24% id,
82% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 24% id,
76% cov

RHE_RS27410 RHE_PF00188 WP_011428496.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 22% id,
95% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 25% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1242979-1244022 (frame +1) on NC_007761.1 Rhizobium etli CFN 42, complete sequence
is similar to:		 PaperBLAST

ABZR86_RS11580: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica

 30% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory