Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium etli CFN 42 (GCF_000092045.1)

Found 12 curated entries in PaperBLAST's database that match '5.3.2.6' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Rhizobium etli CFN 42, or try another query

RHE_RS24720 RHE_PE00135 WP_011427992.1: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis

42% id,
97% cov

4OT1_PSEPU / Q01468: 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Pseudomonas putida
xylH / Q01468: 4-oxalocrotonate tautomerase subunit (EC 5.3.2.6) from Pseudomonas putida
Q01468: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas putida

42% id,
95% cov

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

42% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory