Curated BLAST for Genomes

 

Curated BLAST

Searching in Arcobacter nitrofigilis DSM 7299 (GCF_000092245.1)

Found 10 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Arcobacter nitrofigilis DSM 7299, or try another query

hisD ARNIT_RS03215 Arnit_0643 WP_013134453.1: histidinol dehydrogenase
is similar to:
PaperBLAST

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

43% id,
99% cov

HISX_ECOLI / P06988: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli
hisD / P06988: histidinal/histidinol dehydrogenase (EC 1.1.1.23) from Escherichia coli

37% id,
97% cov

his2 / RF|NP_595886.1: histidinol dehydrogenase His2 (predicted); EC 1.1.1.23 from Schizosaccharomyces pombe

37% id,
95% cov

More...

hisIE ARNIT_RS01265 Arnit_0254 WP_013134065.1: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

31% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory