Curated BLAST for Genomes

 

Curated BLAST

Searching in Arcobacter nitrofigilis DSM 7299 (GCF_000092245.1)

Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Arcobacter nitrofigilis DSM 7299, or try another query

ARNIT_RS06975 Arnit_1397 WP_013135200.1: tetrahydrodipicolinate N-succinyltransferase N-terminal domain-containing protein
is similar to:
PaperBLAST

Q8NRE3: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Corynebacterium glutamicum

40% id,
89% cov

DAPD_MYCTU / P9WP21: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Mycobacterium tuberculosis
P9WP21: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Mycobacterium tuberculosis

41% id,
73% cov

DAPD_PSEAE / G3XD76: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Pseudomonas aeruginosa

38% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory