Curated BLAST for Genomes

 

Curated BLAST

Searching in Arcobacter nitrofigilis DSM 7299 (GCF_000092245.1)

Found 4 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit A' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Arcobacter nitrofigilis DSM 7299, or try another query

gatA ARNIT_RS07145 Arnit_1430 WP_013135233.1: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
is similar to:
PaperBLAST

GATA_BACSU / O06491: Glutamyl-tRNA(Gln) amidotransferase subunit A; Glu-ADT subunit A; EC 6.3.5.7 from Bacillus subtilis

48% id,
94% cov

GATA_ARATH / Q9LI77: Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Glu-AdT subunit A; EC 6.3.5.7 from Arabidopsis thaliana

44% id,
75% cov

GATA_YEAST / Q03557: Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Glu-AdT subunit A; HMG2-induced ER-remodeling protein 2; Loss of respiratory capacity protein 6; EC 6.3.5.7 from Saccharomyces cerevisiae

36% id,
91% cov

More...

atzF ARNIT_RS13600 Arnit_2705 WP_013136498.1: allophanate hydrolase
is similar to:
PaperBLAST

GATA_BACSU / O06491: Glutamyl-tRNA(Gln) amidotransferase subunit A; Glu-ADT subunit A; EC 6.3.5.7 from Bacillus subtilis

29% id,
97% cov

GATA_ARATH / Q9LI77: Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Glu-AdT subunit A; EC 6.3.5.7 from Arabidopsis thaliana

29% id,
89% cov

GATA_HUMAN / Q9H0R6: Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Glu-AdT subunit A; Glutaminyl-tRNA synthase-like protein 1; EC 6.3.5.7 from Homo sapiens

30% id,
60% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory