Searching in Paraburkholderia atlantica CCGE1002 (GCF_000092885.1)
Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Paraburkholderia atlantica CCGE1002, or try another query
| cysM BC1002_RS11110 BC1002_2223 WP_013090134.1: cysteine synthase CysM is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 36% id, 99% cov |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 35% id, 99% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 41% id, 64% cov |
| BC1002_RS07045 BC1002_1421 WP_013089369.1: cystathionine beta-lyase is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 30% id, 94% cov |
| BC1002_RS24185 BC1002_4871 WP_013092629.1: cystathionine gamma-synthase family protein is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 31% id, 86% cov |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 34% id, 44% cov |
| BC1002_RS30680 BC1002_6216 WP_013093865.1: CBS domain-containing protein is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 23% id, 95% cov |
| BC1002_RS18930 BC1002_3779 WP_013091598.1: CBS domain-containing protein is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 33% id, 59% cov |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 39% id, 31% cov |
| ilvA BC1002_RS08185 BC1002_1649 WP_013089585.1: threonine ammonia-lyase, biosynthetic is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 31% id, 61% cov |
| ilvA BC1002_RS01830 BC1002_0365 WP_274380042.1: threonine ammonia-lyase, biosynthetic is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 31% id, 61% cov |
| BC1002_RS10060 BC1002_2013 WP_013089932.1: O-acetylhomoserine aminocarboxypropyltransferase is similar to: | PaperBLAST |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 35% id, 52% cov |
CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens | 38% id, 39% cov |
| guaB BC1002_RS08675 BC1002_1749 WP_013089682.1: IMP dehydrogenase is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 30% id, 58% cov |
| BC1002_RS11650 BC1002_2328 WP_013090234.1: threo-3-hydroxy-L-aspartate ammonia-lyase is similar to: | PaperBLAST |
CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens | 27% id, 46% cov |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus | 25% id, 46% cov |
CBS / A0A563XPB1: cystathionine β-synthase (EC 4.2.1.22) from Gallus gallus | 27% id, 38% cov |
| BC1002_RS13000 BC1002_2601 WP_013090490.1: transporter associated domain-containing protein is similar to: | PaperBLAST |
Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus | 27% id, 20% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2601668-2602816 (frame -3) on NC_014117.1 Paraburkholderia atlantica chromosome 1, complete sequence is similar to: | PaperBLAST |
CBS_RAT / P32232: Cystathionine beta-synthase; Beta-thionase; Hemoprotein H-450; Serine sulfhydrase; EC 4.2.1.22 from Rattus norvegicus | 26% id, 54% cov |
Lawrence Berkeley National Laboratory