Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia atlantica CCGE1002 (GCF_000092885.1)

Found 20 curated entries in PaperBLAST's database that match '4.2.1.91' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Paraburkholderia atlantica CCGE1002, or try another query

BC1002_RS15530 BC1002_3098 WP_013090949.1: transporter substrate-binding domain-containing protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

50% id,
97% cov

pheA BC1002_RS11175 BC1002_2236 WP_013090145.1: prephenate dehydratase
is similar to:
PaperBLAST

AROD6_ARATH / Q9SGD6: Arogenate dehydratase/prephenate dehydratase 6, chloroplastic; AtADT6; AtPDT6; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana
Q9SGD6: arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana

35% id,
87% cov

AROD2_PETHY / D3U716: Arogenate dehydratase 2; PhADT2; Prephenate dehydratase ADT3; EC 4.2.1.91; EC 4.2.1.51 from Petunia hybrida
D3U716: arogenate dehydratase (EC 4.2.1.91) from Petunia x

35% id,
84% cov

AROD4_ARATH / O22241: Arogenate dehydratase 4, chloroplastic; AtADT4; EC 4.2.1.91 from Arabidopsis thaliana
O22241: arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana

35% id,
83% cov

More...

BC1002_RS18880 BC1002_3769 WP_041735296.1: transporter substrate-binding domain-containing protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

27% id,
98% cov

BC1002_RS16405 BC1002_3274 WP_013091119.1: ABC transporter substrate-binding protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

27% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory