Curated BLAST for Genomes

 

Curated BLAST

Searching in Kyrpidia tusciae DSM 2912 (GCF_000092905.1)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.182' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Kyrpidia tusciae DSM 2912, or try another query

BTUS_RS04780 Btus_0948 WP_280990929.1: 2-isopropylmalate synthase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

32% id,
100% cov

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

50% id,
11% cov

BTUS_RS06315 Btus_1269 WP_013075286.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

22% id,
54% cov

BTUS_RS09340 Btus_1869 WP_013075855.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

21% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory