Curated BLAST for Genomes

 

Curated BLAST

Searching in Kyrpidia tusciae DSM 2912 (GCF_000092905.1)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Kyrpidia tusciae DSM 2912, or try another query

serC BTUS_RS05070 Btus_1006 WP_013075035.1: 3-phosphoserine/phosphohydroxythreonine transaminase
is similar to:
PaperBLAST

SERC_NIACI / Q59196: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Niallia circulans
Q59196: phosphoserine transaminase (EC 2.6.1.52) from Niallia circulans

62% id,
100% cov

SERC_ALKAL / Q9RME2: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Alkalihalobacillus alcalophilus
Q9RME2: phosphoserine transaminase (EC 2.6.1.52) from Alkalihalobacillus alcalophilus

60% id,
99% cov

SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster

47% id,
99% cov

More...

BTUS_RS05245 Btus_1044 WP_013075073.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

39% id,
96% cov

serC / P74281: serine—glyoxylate transaminase (EC 2.6.1.52) from Synechocystis sp.
P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

37% id,
99% cov

BTUS_RS05500 Btus_1095 WP_013075122.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

28% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory