Curated BLAST for Genomes

 

Curated BLAST

Searching in Kyrpidia tusciae DSM 2912 (GCF_000092905.1)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Kyrpidia tusciae DSM 2912, or try another query

glnA BTUS_RS08170 Btus_1642 WP_013075638.1: type I glutamate--ammonia ligase
is similar to:
PaperBLAST

GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis
P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis

73% id,
100% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

73% id,
99% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

62% id,
100% cov

More...

glnA BTUS_RS02405 Btus_0476 WP_013074537.1: type I glutamate--ammonia ligase
is similar to:
PaperBLAST

GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor
P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor

58% id,
100% cov

GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.

56% id,
100% cov

GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp.
P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.

57% id,
99% cov

More...

BTUS_RS06850 Btus_1374 WP_013075381.1: glutamine synthetase family protein
is similar to:
PaperBLAST

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

34% id,
99% cov

P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

33% id,
98% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

33% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory