Curated BLAST for Genomes

 

Curated BLAST

Searching in Kyrpidia tusciae DSM 2912 (GCF_000092905.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Kyrpidia tusciae DSM 2912, or try another query

asnB BTUS_RS01465 Btus_0290 WP_013074357.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

50% id,
100% cov

B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris

27% id,
83% cov

ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae

25% id,
87% cov

More...

asnB BTUS_RS03560 Btus_0702 WP_013074756.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

48% id,
99% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

45% id,
98% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

33% id,
93% cov

More...

purF BTUS_RS04125 Btus_0819 WP_013074864.1: amidophosphoribosyltransferase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
46% cov

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

28% id,
30% cov

glmS BTUS_RS01030 Btus_0199 WP_013074270.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

27% id,
29% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

22% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory