Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfarculus baarsii DSM 2075 (GCF_000143965.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Desulfarculus baarsii DSM 2075, or try another query

DEBA_RS09890 Deba_1979 WP_013258785.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 52% id,
98% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 52% id,
98% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 49% id,
100% cov

More...

DEBA_RS09355 Deba_1873 WP_013258679.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 48% id,
96% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 39% id,
100% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 33% id,
97% cov

More...

alaC DEBA_RS06895 Deba_1381 WP_013258202.1: alanine transaminase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 44% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 38% id,
100% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 30% id,
99% cov

More...

hisC DEBA_RS13505 Deba_2712 WP_013259505.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 39% id,
99% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 28% id,
91% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 29% id,
84% cov

More...

DEBA_RS00455 Deba_0092 WP_013256927.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 39% id,
99% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 36% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 34% id,
100% cov

More...

DEBA_RS03610 Deba_0721 WP_013257548.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 37% id,
98% cov

DEBA_RS08680 Deba_1734 WP_013258553.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 31% id,
96% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 30% id,
96% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

 28% id,
99% cov

More...

DEBA_RS04245 Deba_0847 WP_013257671.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 30% id,
96% cov

DEBA_RS15580 Deba_3118 WP_013259908.1: aminotransferase class IV
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 28% id,
89% cov

DEBA_RS05485 Deba_1099 WP_013257921.1: threonine-phosphate decarboxylase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 25% id,
85% cov

DEBA_RS12700 Deba_2547 WP_013259341.1: phage major capsid protein
is similar to:		 PaperBLAST

ASPAT_MYCTU / O69689: Aspartate aminotransferase; AspAT; EC 2.6.1.1 from Mycobacterium tuberculosis
O69689: aspartate transaminase (EC 2.6.1.1) from Mycobacterium tuberculosis

 28% id,
23% cov

DEBA_RS03285 Deba_0659 WP_013257486.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 32% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory