Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfarculus baarsii DSM 2075 (GCF_000143965.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulfarculus baarsii DSM 2075, or try another query

hemL DEBA_RS02875 Deba_0577 WP_013257404.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

36% id,
92% cov

DEBA_RS08680 Deba_1734 WP_013258553.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
86% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
90% cov

V5M241: tyrosine transaminase (EC 2.6.1.5) from Petunia x

24% id,
85% cov

More...

DEBA_RS00455 Deba_0092 WP_013256927.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
91% cov

DEBA_RS09890 Deba_1979 WP_013258785.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
79% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
83% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

21% id,
93% cov

DEBA_RS05485 Deba_1099 WP_013257921.1: threonine-phosphate decarboxylase
is similar to:
PaperBLAST

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

20% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory