Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfarculus baarsii DSM 2075 (GCF_000143965.1)

Found 119 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 94 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfarculus baarsii DSM 2075, or try another query

DEBA_RS11145 Deba_2234 WP_013259039.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

27% id,
80% cov

lysA DEBA_RS09380 Deba_1878 WP_013258684.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

P9WQA3: fructose-bisphosphate aldolase (EC 4.1.2.13) from Mycobacterium tuberculosis

29% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory