Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfarculus baarsii DSM 2075 (GCF_000143965.1)

Found 5 curated entries in PaperBLAST's database that match '5.3.3.18' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Desulfarculus baarsii DSM 2075, or try another query

DEBA_RS03345 Deba_0670 WP_013257497.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

40% id,
98% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

37% id,
99% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

35% id,
97% cov

DEBA_RS05560 Deba_1114 WP_013257936.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

35% id,
99% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

31% id,
100% cov

DEBA_RS06445 Deba_1292 WP_013258113.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

35% id,
100% cov

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

34% id,
100% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

32% id,
99% cov

DEBA_RS16275 Deba_3257 WP_013260046.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

33% id,
100% cov

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

32% id,
98% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

33% id,
95% cov

DEBA_RS12230 Deba_2448 WP_013259248.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

34% id,
98% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

28% id,
100% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

29% id,
95% cov

DEBA_RS15115 Deba_3026 WP_013259816.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

35% id,
87% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

32% id,
93% cov

DEBA_RS05480 Deba_1098 WP_013257920.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

30% id,
100% cov

DEBA_RS02645 Deba_0530 WP_013257357.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

30% id,
100% cov

DEBA_RS14405 Deba_2889 WP_013259680.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

31% id,
96% cov

DEBA_RS12215 Deba_2445 WP_013259245.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

30% id,
97% cov

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

31% id,
94% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

29% id,
94% cov

DEBA_RS00425 Deba_0086 WP_013256921.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

Q5SLK3: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Thermus thermophilus

32% id,
89% cov

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

32% id,
74% cov

PAAG_ECOLI / P77467: 1,2-epoxyphenylacetyl-CoA isomerase; EC 5.3.3.18 from Escherichia coli
YdbT / b1394: putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (EC 5.3.3.18) from Escherichia coli
P77467: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase (EC 5.3.3.18) from Escherichia coli

31% id,
73% cov

DEBA_RS16520 Deba_0032 WP_013256867.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

34% id,
81% cov

DEBA_RS05170 Deba_1036 WP_013257858.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

H281DRAFT_05722: 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) from Paraburkholderia bryophila

32% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory