Curated BLAST for Genomes

 

Curated BLAST

Searching in Leeuwenhoekiella blandensis MED217 (GCF_000152985.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Leeuwenhoekiella blandensis MED217, or try another query

proC MED217_RS10875 MED217_11019 WP_009780572.1: pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.

46% id,
99% cov

BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron

36% id,
100% cov

Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi

30% id,
99% cov

More...

proC MED217_RS04740 MED217_04777 WP_009779343.1: pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis

36% id,
96% cov

P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli
ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli
proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli

33% id,
99% cov

DvMF_3161: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris

32% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory