Curated BLAST for Genomes

 

Curated BLAST

Searching in Leeuwenhoekiella blandensis MED217 (GCF_000152985.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Leeuwenhoekiella blandensis MED217, or try another query

MED217_RS06535 MED217_06596 WP_009779700.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

ERG10 / P41338: Erg10 (EC 2.3.1.16) from Saccharomyces cerevisiae

56% id,
100% cov

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

52% id,
98% cov

ACAT1 / P24752: acetyl-CoA acetyltransferase monomer (EC 2.3.1.16) from Homo sapiens

55% id,
91% cov

More...

MED217_RS07750 MED217_07826 WP_009779946.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

53% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

45% id,
99% cov

HP15_1513: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Marinobacter adhaerens

43% id,
100% cov

More...

MED217_RS03360 MED217_03385 WP_009779068.1: hydroxymethylglutaryl-CoA reductase, degradative
is similar to:
PaperBLAST

mvaE / Q9FD70: acetyl-CoA acetyltransferase/HMG-CoA reductase (EC 1.1.1.34; EC 2.3.1.16) from Enterococcus faecalis

35% id,
51% cov

MED217_RS08105 MED217_08200 WP_009780018.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
38% cov

MED217_RS17570 MED217_17870 WP_009781909.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

43% id,
24% cov

MED217_RS03180 MED217_03215 WP_009779036.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

24% id,
30% cov

fabF MED217_RS00090 MED217_00095 WP_009778414.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

33% id,
13% cov

ECHB_RAT / Q60587: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Rattus norvegicus

33% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory