Curated BLAST
Searching in Rhodomicrobium vannielii ATCC 17100 (GCF_000166055.1)
Found 11 curated entries in PaperBLAST's database that match '2.3.3.21' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhodomicrobium vannielii ATCC 17100, or try another query
cimA RVAN_RS08400 Rvan_1670 WP_013419315.1: citramalate synthase
is similar to: | PaperBLAST |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens
cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens
Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 49% id,
98% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 47% id,
98% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 43% id,
100% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 43% id,
99% cov |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii
cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii
Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 30% id,
99% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans
cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 26% id,
98% cov |
More... |
RVAN_RS08440 Rvan_1678 WP_013419323.1: 2-isopropylmalate synthase
is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii
cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii
Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 40% id,
99% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 30% id,
99% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans
cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 30% id,
98% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 29% id,
100% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 29% id,
96% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens
cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens
Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 27% id,
99% cov |
More... |
nifV RVAN_RS05675 Rvan_1127 WP_013418802.1: homocitrate synthase
is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii
cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii
Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 35% id,
76% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans
cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 33% id,
71% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 30% id,
74% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 28% id,
69% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens
cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens
Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 29% id,
63% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 27% id,
66% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory