Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodomicrobium vannielii ATCC 17100 (GCF_000166055.1)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Rhodomicrobium vannielii ATCC 17100, or try another query

hisC RVAN_RS15315 Rvan_3048 WP_013420621.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

40% id,
97% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

25% id,
85% cov

Q9C969: aromatic-amino-acid transaminase (EC 2.6.1.57) from Arabidopsis thaliana

22% id,
81% cov

RVAN_RS06420 Rvan_1278 WP_013418943.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

38% id,
99% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

37% id,
99% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

36% id,
91% cov

RVAN_RS01125 Rvan_0222 WP_013417919.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

39% id,
96% cov

RVAN_RS16195 Rvan_3230 WP_013420784.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

37% id,
95% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

33% id,
98% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

33% id,
98% cov

More...

RVAN_RS16200 Rvan_3231 WP_013420785.1: pyridoxal-dependent decarboxylase
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

36% id,
94% cov

cobD RVAN_RS18360 Rvan_3663 WP_041787865.1: threonine-phosphate decarboxylase CobD
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

31% id,
96% cov

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

24% id,
53% cov

RVAN_RS17170 Rvan_3425 WP_013420964.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

31% id,
92% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
91% cov

Q9C969: aromatic-amino-acid transaminase (EC 2.6.1.57) from Arabidopsis thaliana

26% id,
93% cov

More...

RVAN_RS16875 Rvan_3370 WP_169309579.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
90% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
85% cov

A0A1D8PPA8: aromatic-amino-acid transaminase (EC 2.6.1.57) from Candida albicans

35% id,
21% cov

RVAN_RS11225 Rvan_2228 WP_013419835.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

26% id,
90% cov

RVAN_RS17125 Rvan_3416 WP_013420956.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

22% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory