Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor hydrothermalis 108 (GCF_000166355.1)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caldicellulosiruptor hydrothermalis 108, or try another query

xylB CALHY_RS10535 Calhy_2080 WP_013403936.1: xylulokinase
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

51% id,
97% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

40% id,
100% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

40% id,
99% cov

More...

xylB CALHY_RS00630 Calhy_0127 WP_013402101.1: xylulokinase
is similar to:
PaperBLAST

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

35% id,
100% cov

XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli
XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli
xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli
xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli

32% id,
99% cov

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

33% id,
97% cov

More...

CALHY_RS09320 Calhy_1844 WP_013403708.1: rhamnulokinase family protein
is similar to:
PaperBLAST

XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli
XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli
xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli
xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli

26% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory