Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor hydrothermalis 108 (GCF_000166355.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caldicellulosiruptor hydrothermalis 108, or try another query

CALHY_RS10640 Calhy_2100 WP_013403955.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

41% id,
97% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

38% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

38% id,
98% cov

More...

CALHY_RS08950 Calhy_1767 WP_013403638.1: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

41% id,
93% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

36% id,
97% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

36% id,
91% cov

CALHY_RS10325 Calhy_2039 WP_013403895.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

32% id,
99% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

34% id,
88% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

30% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory