Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor hydrothermalis 108 (GCF_000166355.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Caldicellulosiruptor hydrothermalis 108, or try another query

CALHY_RS03470 Calhy_0682 WP_013402622.1: carbohydrate kinase
is similar to:
PaperBLAST

O82616: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

40% id,
98% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

40% id,
98% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

39% id,
98% cov

More...

CALHY_RS03245 Calhy_0637 WP_013402581.1: carbohydrate kinase
is similar to:
PaperBLAST

O82616: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

38% id,
97% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

37% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

37% id,
98% cov

More...

CALHY_RS02545 Calhy_0501 WP_013402452.1: sugar kinase
is similar to:
PaperBLAST

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

38% id,
96% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

37% id,
97% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

37% id,
97% cov

More...

CALHY_RS10640 Calhy_2100 WP_013403955.1: ROK family protein
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

28% id,
95% cov

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

27% id,
99% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

27% id,
59% cov

CALHY_RS00660 Calhy_0133 WP_013402107.1: sugar kinase
is similar to:
PaperBLAST

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

26% id,
98% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

25% id,
97% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

25% id,
97% cov

More...

pfkB CALHY_RS12555 Calhy_2479 WP_013404313.1: 1-phosphofructokinase
is similar to:
PaperBLAST

scrK / Q9ZHJ6: fructokinase (EC 2.7.1.4) from Clostridium beijerinckii

30% id,
85% cov

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

27% id,
91% cov

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum

27% id,
85% cov

More...

CALHY_RS10325 Calhy_2039 WP_013403895.1: ROK family protein
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

25% id,
89% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

32% id,
50% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

27% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

738724-739704 (frame +1) on NC_014652.1 Caldicellulosiruptor hydrothermalis 108, complete sequence
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa
Also see hits to annotated proteins above

39% id,
100% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa
Also see hits to annotated proteins above

39% id,
100% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

37% id,
98% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory