Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor hydrothermalis 108 (GCF_000166355.1)

Found 119 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 94 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caldicellulosiruptor hydrothermalis 108, or try another query

fba CALHY_RS10305 Calhy_2035 WP_013289899.1: class II fructose-1,6-bisphosphate aldolase
is similar to:
PaperBLAST

ALF_GIAIC / A8B2U2: Fructose-bisphosphate aldolase; Glfba; glFBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Giardia intestinalis

54% id,
99% cov

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

53% id,
100% cov

ALF_THECA / Q703I2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Thermus caldophilus

52% id,
100% cov

More...

CALHY_RS00635 Calhy_0128 WP_013402102.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

39% id,
99% cov

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

38% id,
98% cov

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

38% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory