Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor kronotskyensis 2002 (GCF_000166775.1)

Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caldicellulosiruptor kronotskyensis 2002, or try another query

hisG CALKRO_RS06250 Calkro_1231 WP_013430203.1: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

PS417_04415: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas simiae

48% id,
98% cov

PfGW456L13_5001: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens

48% id,
98% cov

Pf1N1B4_1067: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens

48% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory