Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor kronotskyensis 2002 (GCF_000166775.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caldicellulosiruptor kronotskyensis 2002, or try another query

CALKRO_RS10530 Calkro_2082 WP_013430999.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

41% id,
97% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

39% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

37% id,
98% cov

More...

CALKRO_RS08755 Calkro_1734 WP_013430675.1: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

41% id,
93% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

36% id,
97% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
91% cov

CALKRO_RS10160 Calkro_2009 WP_013430927.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

34% id,
88% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
99% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

30% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory