Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor kronotskyensis 2002 (GCF_000166775.1)

Found 31 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Caldicellulosiruptor kronotskyensis 2002, or try another query

CALKRO_RS05030 Calkro_1004 WP_013429993.1: histidinol-phosphatase HisJ family protein
is similar to:
PaperBLAST

Q02150: histidinol-phosphatase (EC 3.1.3.15) from Lactococcus lactis

34% id,
95% cov

hisB CALKRO_RS06265 Calkro_1234 WP_013430206.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

50% id,
54% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

50% id,
54% cov

HIS7_BACTN / Q8ABA7: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Bacteroides thetaiotaomicron

49% id,
52% cov

More...

CALKRO_RS12980 Calkro_2574 WP_013431436.1: alkaline phosphatase
is similar to:
PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

30% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1409706-1410326 (frame +3) on NC_014720.1 Caldicellulosiruptor kronotskyensis 2002, complete sequence
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
Also see hits to annotated proteins above

48% id,
56% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli
Also see hits to annotated proteins above

48% id,
56% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory