Searching in Caldicellulosiruptor kronotskyensis 2002 (GCF_000166775.1)
Found 14 curated entries in PaperBLAST's database that match '4.2.3.4' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Caldicellulosiruptor kronotskyensis 2002, or try another query
aroB CALKRO_RS06850 Calkro_1351 WP_013430318.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
Q8U0A8: 3-dehydroquinate synthase (EC 4.2.3.4) from Pyrococcus furiosus | 36% id, 97% cov |
Q3M4V2: 3-dehydroquinate synthase (EC 4.2.3.4) from Trichormus variabilis | 35% id, 93% cov |
AROB_ECOLI / P07639: 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli | 34% id, 92% cov |
aroA CALKRO_RS09125 Calkro_1810 WP_013430743.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 29% id, 28% cov |
aroE CALKRO_RS04160 Calkro_0826 WP_013429849.1: shikimate dehydrogenase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 30% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory