Curated BLAST for Genomes

 

Curated BLAST

Searching in Caldicellulosiruptor kronotskyensis 2002 (GCF_000166775.1)

Found 12 curated entries in PaperBLAST's database that match '4.3.1.1' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Caldicellulosiruptor kronotskyensis 2002, or try another query

CALKRO_RS10910 Calkro_2159 WP_013431069.1: aspartate ammonia-lyase
is similar to:
PaperBLAST

ASPA_BACSP / Q9LCC6: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Bacillus sp.
Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp.

50% id,
97% cov

ASPA_BACSU / P26899: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Bacillus subtilis

49% id,
96% cov

ASPA_PSEAE / Q9HTD7: Aspartate ammonia-lyase; Aspartase; PA-AspA; EC 4.3.1.1 from Pseudomonas aeruginosa
Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa

48% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory