Searching in Caminibacter mediatlanticus TB-2 (GCF_000170735.1)
Found 12 curated entries in PaperBLAST's database that match '3.5.4.19' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Caminibacter mediatlanticus TB-2, or try another query
| hisIE CMTB2_RS05665 CMTB2_08022 WP_007474690.1: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE is similar to: | PaperBLAST |
HIS3_METTH / O26347: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 from Methanothermobacter thermautotrophicus | 57% id, 73% cov |
HisE / b2026: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli | 40% id, 95% cov |
HIS3_METVA / Q50837: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 from Methanococcus vannielii | 54% id, 69% cov |
| hisD CMTB2_RS00390 CMTB2_01748 WP_007472909.1: histidinol dehydrogenase is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 37% id, 54% cov |
| recR CMTB2_RS00060 CMTB2_01413 WP_007472778.1: recombination mediator RecR is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 26% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 44986-45648 (frame +1) on NZ_ABCJ01000005.1 Caminibacter mediatlanticus TB-2 1103207000290, whole genome shotgun sequence is similar to: | PaperBLAST |
HIS3_METTH / O26347: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 from Methanothermobacter thermautotrophicus | 55% id, 80% cov |
HIS2_SCHPO / O59667: Histidine biosynthesis bifunctional protein his7; EC 3.5.4.19; EC 3.6.1.31 from Schizosaccharomyces pombe | 30% id, 50% cov |
Lawrence Berkeley National Laboratory