Curated BLAST for Genomes

 

Curated BLAST

Searching in Caminibacter mediatlanticus TB-2 (GCF_000170735.1)

Found 45 curated entries in PaperBLAST's database that match '4.4.1.13' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Caminibacter mediatlanticus TB-2, or try another query

CMTB2_RS00685 CMTB2_02043 WP_007473014.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

28% id,
89% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

29% id,
88% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

25% id,
94% cov

More...

CMTB2_RS00355 CMTB2_01708 WP_007472892.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
is similar to:
PaperBLAST

Q73GL9: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); alanine racemase (EC 5.1.1.1); glutamate racemase (EC 5.1.1.3) from Wolbachia pipientis

25% id,
97% cov

STR3_YEAST / P53101: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; Sulfur transfer protein 3; EC 4.4.1.13 from Saccharomyces cerevisiae
STR3 / P53101: cystathionine β-lyase (EC 4.4.1.13) from Saccharomyces cerevisiae

27% id,
86% cov

E3VL26: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Saccharomyces cerevisiae

27% id,
86% cov

More...

CMTB2_RS04230 CMTB2_00804 WP_007474288.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

22% id,
94% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

24% id,
87% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

24% id,
85% cov

More...

CMTB2_RS07105 CMTB2_06396 WP_007475111.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

23% id,
89% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus

22% id,
89% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

20% id,
93% cov

More...

CMTB2_RS05595 CMTB2_07952 WP_007474676.1: pyridoxal-phosphate dependent enzyme
is similar to:
PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

31% id,
63% cov

hisC CMTB2_RS03835 CMTB2_07646 WP_007474130.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

A0A223K4L6: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); amino-acid racemase (EC 5.1.1.10) from Latilactobacillus sakei

25% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

69112-70347 (frame -2) on NZ_ABCJ01000007.1 Caminibacter mediatlanticus TB-2 1103207000288, whole genome shotgun sequence
is similar to:
PaperBLAST

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens
Also see hits to annotated proteins above

22% id,
91% cov

KAT3_MOUSE / Q71RI9: Kynurenine--oxoglutarate transaminase 3; Cysteine-S-conjugate beta-lyase 2; Kynurenine aminotransferase 3; Kynurenine aminotransferase III; KATIII; Kynurenine--glyoxylate transaminase; Kynurenine--oxoglutarate transaminase III; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.63 from Mus musculus
Q71RI9: glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mus musculus
Also see hits to annotated proteins above

22% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory