Searching in Caminibacter mediatlanticus TB-2 (GCF_000170735.1)
Found 13 curated entries in PaperBLAST's database that match '6.2.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Caminibacter mediatlanticus TB-2, or try another query
| CMTB2_RS01995 CMTB2_03373 WP_007473537.1: fatty acid--CoA ligase is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 31% id, 94% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 90% cov |
PAAK_PSEPU / O33469: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Pseudomonas putida | 25% id, 49% cov |
| acs CMTB2_RS04300 CMTB2_00879 WP_007474311.1: acetate--CoA ligase is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 52% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 22% id, 32% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 28% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 72365-74377 (frame -2) on NZ_ABCJ01000003.1 Caminibacter mediatlanticus TB-2 1103207000282, whole genome shotgun sequence is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 49% cov |
Lawrence Berkeley National Laboratory