Curated BLAST for Genomes

 

Curated BLAST

Searching in Caminibacter mediatlanticus TB-2 (GCF_000170735.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Caminibacter mediatlanticus TB-2, or try another query

CMTB2_RS00185 CMTB2_01538 WP_007472826.1: anthranilate synthase component I family protein
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

43% id,
92% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

38% id,
94% cov

trpE: anthranilate synthase component I; EC 4.1.3.27 from Leptospira biflexa

37% id,
93% cov

More...

CMTB2_RS01800 CMTB2_03183 WP_040304857.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

30% id,
66% cov

trpE: anthranilate synthase component I; EC 4.1.3.27 from Leptospira biflexa

26% id,
60% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

28% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory