Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter algicola DG893 (GCF_000170835.1)

Found 5 curated entries in PaperBLAST's database that match '1.1.5.13' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Marinobacter algicola DG893, or try another query

MDG893_RS15820 MDG893_01700 WP_007154818.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

LHGD_ECOLI / P37339: L-2-hydroxyglutarate dehydrogenase; L2HG dehydrogenase; L2HG:quinone oxidoreductase; EC 1.1.5.13 from Escherichia coli
LhgD / b2660: L-2-hydroxyglutarate dehydrogenase (EC 1.1.5.13) from Escherichia coli
lhgD / P37339: L-2-hydroxyglutarate dehydrogenase (EC 1.1.5.13) from Escherichia coli

27% id,
93% cov

LHGD_ECOLU / B7N6P4: L-2-hydroxyglutarate dehydrogenase; L2HG dehydrogenase; L2HG:quinone oxidoreductase; EC 1.1.5.13 from Escherichia coli

27% id,
93% cov

LHGD_SALHO / A0A5Y6MCT2: L-2-hydroxyglutarate dehydrogenase; L2HG dehydrogenase; L2HG:quinone oxidoreductase; EC 1.1.5.13 from Salmonella houtenae

29% id,
68% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory