Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter algicola DG893 (GCF_000170835.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Marinobacter algicola DG893, or try another query

MDG893_RS02890 MDG893_07410 WP_007152220.1: carbohydrate kinase
is similar to:
PaperBLAST

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

45% id,
98% cov

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

38% id,
100% cov

O82616: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

39% id,
96% cov

More...

MDG893_RS00925 MDG893_10486 WP_007151823.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

42% id,
99% cov

MDG893_RS20260 MDG893_17162 WP_040474840.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

38% id,
93% cov

MDG893_RS02490 MDG893_06990 WP_040474246.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

paaF MDG893_RS16740 MDG893_12455 WP_007155005.1: 2,3-dehydroadipyl-CoA hydratase PaaF
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
96% cov

MDG893_RS05725 MDG893_16312 WP_157132782.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

32% id,
84% cov

MDG893_RS05695 MDG893_16282 WP_007152782.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
99% cov

MDG893_RS14180 MDG893_15967 WP_007154497.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

25% id,
98% cov

MDG893_RS20385 MDG893_01940 WP_007155748.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

24% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory