Curated BLAST for Genomes

 

Curated BLAST

Searching in Anaerobutyricum hallii DSM 3353 (GCF_000173975.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.13' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Anaerobutyricum hallii DSM 3353, or try another query

EUBHAL_RS06695 EUBHAL_01518 WP_005346963.1: bifunctional chorismate mutase/prephenate dehydratase
is similar to:
PaperBLAST

A8AAX2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis

25% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory