Curated BLAST for Genomes

 

Curated BLAST

Searching in Anaerobutyricum hallii DSM 3353 (GCF_000173975.1)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%large' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Anaerobutyricum hallii DSM 3353, or try another query

carB EUBHAL_RS11955 EUBHAL_02703 WP_005350103.1: carbamoyl-phosphate synthase large subunit
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

52% id,
91% cov

EUBHAL_RS05825 EUBHAL_01314 WP_005346333.1: pyruvate carboxylase
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

23% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory