Curated BLAST for Genomes

 

Curated BLAST

Searching in Granulicella mallensis MP5ACTX8 (GCF_000178955.2)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.8' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Granulicella mallensis MP5ACTX8, or try another query

glk ACIX8_RS22990 AciX8_4658 WP_014267799.1: glucokinase
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

31% id,
98% cov

ACIX8_RS04655 AciX8_0937 WP_263053387.1: sugar kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

32% id,
93% cov

ACIX8_RS20320 AciX8_4113 WP_014267265.1: carbohydrate kinase family protein
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

28% id,
98% cov

ACIX8_RS04350 AciX8_0876 WP_014264107.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

27% id,
92% cov

treS ACIX8_RS05805 AciX8_1169 WP_014264393.1: maltose alpha-D-glucosyltransferase
is similar to:
PaperBLAST

GLCNK_STRJI / A0A1H7TQR5: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Streptacidiphilus jiangxiensis
A0A1H7TQR5: glucosamine kinase (EC 2.7.1.8) from Streptacidiphilus jiangxiensis

26% id,
87% cov

GLCNK_MYCS2 / I7FJX8: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Mycolicibacterium smegmatis
I7FJX8: glucosamine kinase (EC 2.7.1.8) from Mycolicibacterium smegmatis

29% id,
56% cov

ACIX8_RS04325 AciX8_0871 WP_014264102.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

35% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory