Curated BLAST for Genomes

 

Curated BLAST

Searching in Granulicella mallensis MP5ACTX8 (GCF_000178955.2)

Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Granulicella mallensis MP5ACTX8, or try another query

ACIX8_RS19360 AciX8_3922 WP_263053376.1: type I phosphomannose isomerase catalytic subunit
is similar to:
PaperBLAST

Q5SIM4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Thermus thermophilus

38% id,
98% cov

MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

36% id,
86% cov

A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans

36% id,
86% cov

More...

ACIX8_RS10470 AciX8_2104 WP_014265311.1: mannose-1-phosphate guanylyltransferase
is similar to:
PaperBLAST

ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa
algA / P07874: phosphomannose isomerase (EC 5.3.1.8; EC 2.7.7.13) from Pseudomonas aeruginosa

37% id,
73% cov

algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens

37% id,
72% cov

PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii

33% id,
74% cov

ACIX8_RS10475 AciX8_2105 WP_014265312.1: phosphoglucomutase/phosphomannomutase family protein
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

26% id,
99% cov

glmM ACIX8_RS05150 AciX8_1037 WP_014264265.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

26% id,
97% cov

ACIX8_RS07075 AciX8_1428 WP_150110515.1: cupin domain-containing protein
is similar to:
PaperBLAST

PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii

25% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory