Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella inopinata BO1 (GCF_000182725.1)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Brucella inopinata BO1, or try another query

fabG BIBO1_RS13740 BIBO1_1772 WP_002963614.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
99% cov

hdhA BIBO1_RS11530 BIBO1_1295 WP_025200128.1: 7-alpha-hydroxysteroid dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
94% cov

BIBO1_RS06125 BIBO1_0119 WP_008503624.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
96% cov

BIBO1_RS19100 BIBO1_2909 WP_008511219.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
98% cov

BIBO1_RS08590 BIBO1_0652 WP_008505361.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
97% cov

BIBO1_RS10470 BIBO1_1062 WP_002965365.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
98% cov

BIBO1_RS09795 BIBO1_0915 WP_008506042.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
94% cov

BIBO1_RS13685 BIBO1_1759 WP_002966703.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory