Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella inopinata BO1 (GCF_000182725.1)

Found 2 curated entries in PaperBLAST's database that match '2.7.1.13' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Brucella inopinata BO1, or try another query

iolC BIBO1_RS16980 BIBO1_2459 WP_008510314.1: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

30% id,
95% cov

BIBO1_RS08880 BIBO1_0714 WP_008505487.1: sugar kinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

26% id,
91% cov

BIBO1_RS10680 BIBO1_1107 WP_002965417.1: adenosine kinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

38% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory