Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella inopinata BO1 (GCF_000182725.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Brucella inopinata BO1, or try another query

rbsK BIBO1_RS15020 BIBO1_2050 WP_008509047.1: ribokinase
is similar to:
PaperBLAST

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

41% id,
97% cov

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

40% id,
98% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

40% id,
98% cov

More...

BIBO1_RS10465 BIBO1_1061 WP_008506488.1: carbohydrate kinase
is similar to:
PaperBLAST

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

27% id,
99% cov

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli

28% id,
89% cov

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

25% id,
95% cov

More...

BIBO1_RS08880 BIBO1_0714 WP_008505487.1: sugar kinase
is similar to:
PaperBLAST

HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae

27% id,
89% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

24% id,
89% cov

BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis

25% id,
84% cov

More...

iolC BIBO1_RS16980 BIBO1_2459 WP_008510314.1: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

26% id,
86% cov

BIBO1_RS10680 BIBO1_1107 WP_002965417.1: adenosine kinase
is similar to:
PaperBLAST

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

24% id,
87% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

25% id,
79% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

24% id,
78% cov

rpiA BIBO1_RS08085 BIBO1_0546 WP_008505055.1: ribose-5-phosphate isomerase RpiA
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

40% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory