Curated BLAST for Genomes

 

Curated BLAST

Searching in Brucella inopinata BO1 (GCF_000182725.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Brucella inopinata BO1, or try another query

BIBO1_RS19405 BIBO1_2973 WP_025200402.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

39% id,
97% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

39% id,
96% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

33% id,
96% cov

More...

BIBO1_RS16525 BIBO1_2363 WP_008510013.1: putative N-acetylmannosamine-6-phosphate 2-epimerase
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

34% id,
97% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

32% id,
98% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

32% id,
97% cov

More...

BIBO1_RS14955 BIBO1_2029 WP_008508951.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

31% id,
96% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

31% id,
96% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

30% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory