Curated BLAST for Genomes

 

Curated BLAST

Searching in Calditerrivibrio nitroreducens DSM 19672 (GCF_000183405.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Calditerrivibrio nitroreducens DSM 19672, or try another query

CALNI_RS04020 Calni_0803 WP_245529737.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

Q939C9: aspartate transaminase (EC 2.6.1.1) from Bacillus subtilis

51% id,
99% cov

CALNI_RS01845 Calni_0373 WP_013450502.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

42% id,
98% cov

hisC CALNI_RS00445 Calni_0089 WP_013450221.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

40% id,
99% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

25% id,
99% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

25% id,
99% cov

More...

CALNI_RS00365 Calni_0074 WP_013450207.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

34% id,
96% cov

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

40% id,
80% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

30% id,
95% cov

More...

CALNI_RS10710 Calni_2119 WP_013447310.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

26% id,
92% cov

mASAT: aspartate aminotransferase; EC 2.6.1.1 from Trypanosoma cruzi
Q4D1Q4: aspartate transaminase (EC 2.6.1.1) from Trypanosoma cruzi

32% id,
24% cov

CALNI_RS10360 Calni_2049 WP_013452149.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

25% id,
93% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

24% id,
95% cov

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

25% id,
83% cov

More...

CALNI_RS09950 Calni_1964 WP_013452068.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:
PaperBLAST

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

30% id,
45% cov

CALNI_RS03105 Calni_0619 WP_013450744.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

24% id,
52% cov

CALNI_RS08470 Calni_1678 WP_013451796.1: cysteine desulfurase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

24% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

380748-381911 (frame +3) on NC_014758.1 Calditerrivibrio nitroreducens DSM 19672, complete sequence
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii
Also see hits to annotated proteins above

41% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory