Curated BLAST for Genomes

 

Curated BLAST

Searching in Calditerrivibrio nitroreducens DSM 19672 (GCF_000183405.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Calditerrivibrio nitroreducens DSM 19672, or try another query

hemL CALNI_RS07435 Calni_1475 WP_013451594.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

34% id,
90% cov

CALNI_RS07780 Calni_1542 WP_013451661.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

31% id,
83% cov

CALNI_RS09630 Calni_1908 WP_013452021.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

27% id,
95% cov

CALNI_RS10360 Calni_2049 WP_013452149.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

28% id,
78% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

29% id,
67% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

28% id,
71% cov

More...

CALNI_RS00365 Calni_0074 WP_013450207.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

23% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory