Curated BLAST for Genomes

 

Curated BLAST

Searching in Calditerrivibrio nitroreducens DSM 19672 (GCF_000183405.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Calditerrivibrio nitroreducens DSM 19672, or try another query

CALNI_RS03820 Calni_0765 WP_013450889.1: acetate kinase
is similar to:
PaperBLAST

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

52% id,
100% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

51% id,
99% cov

AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli
ackA / P0A6A3: acetate kinase (EC 2.7.2.15; EC 2.7.2.7) from Escherichia coli

46% id,
98% cov

More...

buk CALNI_RS03870 Calni_0775 WP_013450899.1: butyrate kinase
is similar to:
PaperBLAST

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

28% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory