Curated BLAST for Genomes

 

Curated BLAST

Searching in Calditerrivibrio nitroreducens DSM 19672 (GCF_000183405.1)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Calditerrivibrio nitroreducens DSM 19672, or try another query

CALNI_RS06460 Calni_1289 WP_013451409.1: glycosyltransferase family 2 protein
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

27% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory