Curated BLAST for Genomes

 

Curated BLAST

Searching in Calditerrivibrio nitroreducens DSM 19672 (GCF_000183405.1)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 2' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Calditerrivibrio nitroreducens DSM 19672, or try another query

CALNI_RS04890 Calni_0978 WP_013451102.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

TRPG_PSEAE / P20576: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

39% id,
99% cov

TRPG_SACS2 / Q06129: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Saccharolobus solfataricus

38% id,
98% cov

TRPG_AZOBR / P26922: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Azospirillum brasilense

39% id,
95% cov

More...

guaA CALNI_RS00660 Calni_0134 WP_013450265.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

TRPG_SACS2 / Q06129: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Saccharolobus solfataricus

29% id,
96% cov

TRPG_AZOBR / P26922: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Azospirillum brasilense

33% id,
77% cov

TRPG_SERMA / P00900: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Serratia marcescens

25% id,
94% cov

More...

carA CALNI_RS00230 Calni_0047 WP_013450180.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

PABA_BACSU / P28819: Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 from Bacillus subtilis

27% id,
89% cov

ASB1_ARATH / Q42565: Anthranilate synthase beta subunit 1, chloroplastic; Anthranilate synthase component 2-1; Anthranilate synthase, glutamine amidotransferase component 2-1; Protein TRYPTOPHAN BIOSYNTHESIS 4; Protein WEAK ETHYLENE INSENSITIVE 7; EC 4.1.3.27 from Arabidopsis thaliana

29% id,
66% cov

CALNI_RS04900 Calni_0980 WP_013451104.1: indole-3-glycerol phosphate synthase TrpC
is similar to:
PaperBLAST

trpC: anthranilate synthase component 2; EC 4.1.3.27 from Emericella nidulans

36% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory