Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sulfuricurvum kujiense DSM 16994 (GCF_000183725.1)

Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Sulfuricurvum kujiense DSM 16994, or try another query

SULKU_RS05840 Sulku_1159 WP_013460019.1: shikimate dehydrogenase is similar to:	PaperBLAST
AROE_HELPY / P56119: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Helicobacter pylori	42% id, 97% cov
AROE_HELPX / Q56S04: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Helicobacter pylori Q56S04: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Helicobacter pylori	43% id, 92% cov
AROE_THET8 / Q5SJF8: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Thermus thermophilus Q5SJF8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Thermus thermophilus	38% id, 95% cov
AROE_ECOLI / P15770: Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Escherichia coli AroE / b3281: shikimate dehydrogenase (EC 1.1.1.25) from Escherichia coli aroE / P15770: shikimate dehydrogenase (EC 1.1.1.25) from Escherichia coli P15770: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Escherichia coli	36% id, 97% cov
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida	36% id, 96% cov
AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus	37% id, 91% cov
O27957: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Archaeoglobus fulgidus	35% id, 93% cov
AROE_METJA / Q58484: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii aroE / Q58484: shikimate dehydrogenase monomer (EC 1.1.1.25) from Methanocaldococcus jannaschii	33% id, 96% cov
AROE_AQUAE / O67049: Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Aquifex aeolicus O67049: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Aquifex aeolicus	33% id, 94% cov
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae	32% id, 94% cov
AROE_STAEQ / Q5HNV1: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Staphylococcus epidermidis Q5HNV1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Staphylococcus epidermidis	33% id, 93% cov
Q9WYI1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Thermotoga maritima	31% id, 96% cov
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus	34% id, 86% cov
Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida	30% id, 90% cov
A4QEK4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Corynebacterium glutamicum	31% id, 86% cov
A0A168S2G5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	33% id, 53% cov
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	33% id, 51% cov
A0A168S2B8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	33% id, 49% cov
A0A6P8EJ47: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Punica granatum	31% id, 51% cov
A0A5H2WVH6: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Eucalyptus camaldulensis	32% id, 48% cov
A0A3G3BK08: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Camellia sinensis	29% id, 51% cov
A0A0A0LQ48: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Cucumis sativus	32% id, 47% cov
D7TUX1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	29% id, 51% cov
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	33% id, 44% cov
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	33% id, 44% cov
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	28% id, 50% cov
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans P07547: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Aspergillus nidulans	29% id, 15% cov
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hemA SULKU_RS04410 Sulku_0869 WP_013459732.1: glutamyl-tRNA reductase is similar to:	PaperBLAST
A0A168S2G5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	23% id, 37% cov
A0A168S2H6: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	27% id, 21% cov
A0A5H2WVH6: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Eucalyptus camaldulensis	25% id, 21% cov
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	26% id, 18% cov
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	28% id, 15% cov
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	21% id, 18% cov
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aroA SULKU_RS04475 Sulku_0882 WP_013459745.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to:	PaperBLAST
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	28% id, 30% cov

aroB SULKU_RS05100 Sulku_1010 WP_013459870.1: 3-dehydroquinate synthase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans P07547: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Aspergillus nidulans	39% id, 19% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	33% id, 18% cov
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii	32% id, 5% cov
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii	38% id, 4% cov
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SULKU_RS00350 Sulku_0072 WP_013458937.1: FAD-dependent oxidoreductase is similar to:	PaperBLAST
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana AT3G06350 / Q9SQT8: shikimate dehydrogenase (EC 1.1.1.25; EC 4.2.1.10) from Arabidopsis thaliana Q9SQT8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arabidopsis thaliana	26% id, 24% cov
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis	24% id, 16% cov
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum	25% id, 16% cov
A0A0A0LQ48: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Cucumis sativus	24% id, 16% cov
A0A5H2WVH6: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Eucalyptus camaldulensis	25% id, 14% cov
A0A168S2B8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	38% id, 8% cov
A0A168S2H6: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera	36% id, 8% cov
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SULKU_RS04050 Sulku_0795 WP_013459658.1: ThiF family adenylyltransferase is similar to:	PaperBLAST
Q88JP1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida	42% id, 14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory