Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuricurvum kujiense DSM 16994 (GCF_000183725.1)

Found 12 curated entries in PaperBLAST's database that match '1.1.1.282' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfuricurvum kujiense DSM 16994, or try another query

SULKU_RS05840 Sulku_1159 WP_013460019.1: shikimate dehydrogenase
is similar to:
PaperBLAST

Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida

30% id,
90% cov

A0A3Q7IET9: quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Solanum lycopersicum

28% id,
52% cov

A0A3Q7H2B2: quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Solanum lycopersicum

31% id,
20% cov

SULKU_RS04050 Sulku_0795 WP_013459658.1: ThiF family adenylyltransferase
is similar to:
PaperBLAST

Q88JP1: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida

42% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory