Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuricurvum kujiense DSM 16994 (GCF_000183725.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfuricurvum kujiense DSM 16994, or try another query

SULKU_RS03710 Sulku_0731 WP_013459594.1: argininosuccinate synthase
is similar to:
PaperBLAST

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

62% id,
97% cov

ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima

51% id,
99% cov

ASSY_SCHPO / O94354: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Schizosaccharomyces pombe
arg12 / RF|NP_595183.1: argininosuccinate synthase (predicted); EC 6.3.4.5 from Schizosaccharomyces pombe

50% id,
98% cov

More...

mnmA SULKU_RS02450 Sulku_0482 WP_013459346.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:
PaperBLAST

ASSY_BOVIN / P14568: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Bos taurus

29% id,
28% cov

ASSY_HUMAN / P00966: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Homo sapiens
ASS1 / P00966: Argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens
P00966: argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens

29% id,
27% cov

ASSY_MOUSE / P16460: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Mus musculus
P16460: argininosuccinate synthase (EC 6.3.4.5) from Mus musculus

29% id,
27% cov

More...

SULKU_RS00390 Sulku_0080 WP_013458945.1: argininosuccinate synthase
is similar to:
PaperBLAST

ASSY_YEAST / P22768: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Saccharomyces cerevisiae

33% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory